Quantitating the Saturation Fraction (Ya) Go back

One measurement of ligand binding is called the "saturation fraction" or the "association fraction." 

How is the saturation fraction used to determine quantities or amounts?  Through precise quantitative measurements, the dynamics of a protein-mediated process can reasonably be related to temporal changes in the saturation fraction for a ligand that participates in and/or regulates the protein's activity.

Essentially three requirements must be met to quantitate ligand binding processes:

  1. A protein's activity must be quantitatively related to the saturation binding fraction of a given ligand, which can be a substrate and/or regulatory molecule.
  2. The biological range of the ligand concentration variations in the cell or in the organism must be known.
  3. The temporal fluctuations of the ligand concentration must also be known.
Ligand binding systems are examined on this site with several exercises appearing with an increasing order of complexity as listed below: 
  1. Monovalent ligand binding systems
  2. Bivalent, non-interactive ligand binding systems
  3. Trivalent, semi-interactive ligand binding systems
  4. Bivalent, interactive ligand binding systems
  5. Multivalent, interactive ligand binding systems
  6. Michaelis-Menten enzyme kinetics
  7. Ligand-regulated enzyme kinetics

© Duane W. Sears
Revised: April 4, 2019