The chemical properties of the R-groups obviously dominate the primary
chemical differences between AAs. The chemical properties of the AA R-groups also dominate
the chemical contribution an AA residue makes to the overall chemistry of a polypeptide or
protein assembled from a given sequence of AAs. Thus, it is useful to consider the
fundamental physical or chemical properties of the R-groups themselves. Classifying AAs
according to the fundamental physical characteristics of their R-groups results in three
basic physical categories -- nonpolar, neutral polar, and charged polar. The individual
AAs representing each of these groupings are found in the tables below:
AA classification according to
specific R-group chemical properties:
Sidechain Chemical Groups |
amide -
Q,
N
|
alcohol -
T,S
|
phenol -
Y
|
methyl -
A |
amino -
K
|
thiol -
C
|
phenyl -
F
|
sec-butyl -
I |
imino group -
P (an imino acid) |
thioether -
M
|
indole -
W
|
isobutyl -
L
|
guanidinium -
R
|
carboxyl -
E,D
|
imidazole -
H
|
isopropyl -
V
|